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SRX25384398: 16S rRNA sequencing of Epinephelus lanceolatus: intestinal content
1 ILLUMINA (Illumina MiSeq) run: 49,135 spots, 29.6M bases, 9.2Mb downloads

Design: 16S rRNA sequencing of Epinephelus lanceolatus: intestinal content
Submitted by: South China Agricultural University
Study: 16S rRNA sequencing analysis of the role of taurine in grouper upon SGIV infection
show Abstracthide Abstract
We performed 16s rRNA amplification-based microbiome analysis to determine the effect of taurine on gut microbiome composition upon SGIV infection. The intestinal content for 16S rRNA sequencing were collected at 3 dpi in the control, 2 g/kg taurine, SGIV, and 2 g/kg taurine + SGIV groups respectively.The PCoA analysis revealed that there was a significant difference in gut microbiota structure between control and SGIV groups, but a high degree of overlap between control and TAU+SGIV group. In detail, compared with the control group, the relative abundances of Bacteroidetes, Actinobacteriota, and Firmicutes were decreased, while that of Proteobacteria was increased in SGIV group. Notably, the relative abundances of probiotics Bacteroidetes in TAU group were significantly increased and that in TAU+SGIV group almost showed no obvious changes compared with the control group.
Sample: taurine_SGIV3
SAMN42623498 • SRS22048547 • All experiments • All runs
Library:
Name: taurine_SGIV3
Instrument: Illumina MiSeq
Strategy: RNA-Seq
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 49,135 spots, 29.6M bases, 9.2Mb
Run# of Spots# of BasesSizePublished
SRR2988825249,13529.6M9.2Mb2024-08-09

ID:
33842972

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